General mapping stats for XUT lncRNAs are produced as capped RNAs
Return
| case |
WT_S288C_1 |
WT_S288C_2 |
xrn1_S288C_1 |
xrn1_S288C_2 |
WT_S288C_Ter_1 |
WT_S288C_Ter_2 |
xrn1_S288C_Ter_1 |
xrn1_S288C_Ter_2 |
WT_37C_1 |
WT_37C_2 |
dcp2_37C_1 |
dcp2_37C_2 |
WT_37C_Ter_1 |
WT_37C_Ter_2 |
dcp2_37C_Ter_1 |
dcp2_37C_Ter_2 |
WT_S288C |
xrn1_S288C |
WT_S288C_Ter |
xrn1_S288C_Ter |
WT_37C |
dcp2_37C |
WT_37C_Ter |
dcp2_37C_Ter |
| total |
56208739 |
105657297 |
136000607 |
114851933 |
56206476 |
40082509 |
58141906 |
51234701 |
98222508 |
102745510 |
110653816 |
97709797 |
43151041 |
42048589 |
61308097 |
57973441 |
161866036 |
250852540 |
96288985 |
109376607 |
200968018 |
208363613 |
85199630 |
119281538 |
| duplicates |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
| mapped |
56208739 |
105657297 |
136000607 |
114851933 |
56206476 |
40082509 |
58141906 |
51234701 |
98222508 |
102745510 |
110653816 |
97709797 |
43151041 |
42048589 |
61308097 |
57973441 |
161866036 |
250852540 |
96288985 |
109376607 |
200968018 |
208363613 |
85199630 |
119281538 |
| paired |
56208739 |
105657297 |
136000607 |
114851933 |
56206476 |
40082509 |
58141906 |
51234701 |
98222508 |
102745510 |
110653816 |
97709797 |
43151041 |
42048589 |
61308097 |
57973441 |
161866036 |
250852540 |
96288985 |
109376607 |
200968018 |
208363613 |
85199630 |
119281538 |
| read1 |
28158112 |
52959365 |
68164670 |
57573135 |
28156785 |
20096754 |
29131086 |
25699047 |
49213957 |
51486073 |
55457906 |
49094532 |
21625336 |
21067687 |
30735133 |
29142349 |
81117477 |
125737805 |
48253539 |
54830133 |
100700030 |
104552438 |
42693023 |
59877482 |
| read2 |
28050627 |
52697932 |
67835937 |
57278798 |
28049691 |
19985755 |
29010820 |
25535654 |
49008551 |
51259437 |
55195910 |
48615265 |
21525705 |
20980902 |
30572964 |
28831092 |
80748559 |
125114735 |
48035446 |
54546474 |
100267988 |
103811175 |
42506607 |
59404056 |
| properly paired |
55693667 |
104553690 |
134887759 |
113853682 |
55880680 |
39674326 |
57886783 |
50928255 |
97073698 |
101606543 |
109868836 |
96381298 |
42941315 |
41846276 |
60949451 |
57514600 |
160247357 |
248741441 |
95555006 |
108815038 |
198680241 |
206250134 |
84787591 |
118464051 |
| itself and mate mapped |
55959332 |
105113850 |
135316682 |
114261734 |
56025956 |
39916182 |
57938280 |
50996830 |
97767650 |
102269004 |
110114056 |
96990126 |
42997336 |
41909540 |
61044688 |
57570766 |
161073182 |
249578416 |
95942138 |
108935110 |
200036654 |
207104182 |
84906876 |
118615454 |
| singletons |
249407 |
543447 |
683925 |
590199 |
180520 |
166327 |
203626 |
237871 |
454858 |
476506 |
539760 |
719671 |
153705 |
139049 |
263409 |
402675 |
792854 |
1274124 |
346847 |
441497 |
931364 |
1259431 |
292754 |
666084 |
| mate mapped on a different chr |
63564 |
222682 |
212982 |
214350 |
23774 |
31806 |
30316 |
38932 |
196414 |
223090 |
204498 |
249944 |
26002 |
29070 |
75514 |
38536 |
286246 |
427332 |
55580 |
69248 |
419504 |
454442 |
55072 |
114050 |
| QC-failed |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
Download as tab file
mai 30 2015 14:57:25
A tool by Marc Descrimes
v2.6