Mapping stats replicates for Sensitivity of XUT lncRNAs to decapping and NMD
Return
| case |
WT_S288C_1 |
WT_S288C_2 |
xrn1_S288C_1 |
xrn1_S288C_2 |
WT_37C_1 |
WT_37C_2 |
dcp2_37C_1 |
dcp2_37C_2 |
WT_UPF1_1 |
WT_UPF1_2 |
upf1_1 |
upf1_2 |
| total |
56208739 |
105657297 |
136000607 |
114851933 |
98222508 |
102745510 |
110653816 |
97709797 |
97628888 |
141470429 |
68122702 |
91175810 |
| duplicates |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
| mapped |
56208739 |
105657297 |
136000607 |
114851933 |
98222508 |
102745510 |
110653816 |
97709797 |
97628888 |
141470429 |
68122702 |
91175810 |
| paired |
56208739 |
105657297 |
136000607 |
114851933 |
98222508 |
102745510 |
110653816 |
97709797 |
97628888 |
141470429 |
68122702 |
91175810 |
| read1 |
28158112 |
52959365 |
68164670 |
57573135 |
49213957 |
51486073 |
55457906 |
49094532 |
49089137 |
71108524 |
34204996 |
45744673 |
| read2 |
28050627 |
52697932 |
67835937 |
57278798 |
49008551 |
51259437 |
55195910 |
48615265 |
48539751 |
70361905 |
33917706 |
45431137 |
| properly paired |
55693667 |
104553690 |
134887759 |
113853682 |
97073698 |
101606543 |
109868836 |
96381298 |
94834768 |
138116770 |
66739121 |
89852453 |
| itself and mate mapped |
55959332 |
105113850 |
135316682 |
114261734 |
97767650 |
102269004 |
110114056 |
96990126 |
96773994 |
140336414 |
67640154 |
90628614 |
| singletons |
249407 |
543447 |
683925 |
590199 |
454858 |
476506 |
539760 |
719671 |
854894 |
1134015 |
482548 |
547196 |
| mate mapped on a different chr |
63564 |
222682 |
212982 |
214350 |
196414 |
223090 |
204498 |
249944 |
1510982 |
1737454 |
724984 |
561368 |
| QC-failed |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
Download as tab file
mai 30 2015 06:16:08
A tool by Marc Descrimes
v2.6