Generic analysis for Smith et al. 2014 Ribo profiling

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WT RP

 upf1 RP vs WT RPWT ctrl vs WT RPupf1 ctrl vs WT RP
WT RP vs upf1 RP

upf1 RP

 WT ctrl vs upf1 RPupf1 ctrl vs upf1 RP
WT RP vs WT ctrlupf1 RP vs WT ctrl

WT ctrl

 upf1 ctrl vs WT ctrl
WT RP vs upf1 ctrlupf1 RP vs upf1 ctrlWT ctrl vs upf1 ctrl

upf1 ctrl

replicates

WT RP 1

 WT RP 2 vs WT RP 1upf1 RP 1 vs WT RP 1upf1 RP 2 vs WT RP 1WT ctrl vs WT RP 1upf1 ctrl vs WT RP 1
WT RP 1 vs WT RP 2

WT RP 2

 upf1 RP 1 vs WT RP 2upf1 RP 2 vs WT RP 2WT ctrl vs WT RP 2upf1 ctrl vs WT RP 2
WT RP 1 vs upf1 RP 1WT RP 2 vs upf1 RP 1

upf1 RP 1

 upf1 RP 2 vs upf1 RP 1WT ctrl vs upf1 RP 1upf1 ctrl vs upf1 RP 1
WT RP 1 vs upf1 RP 2WT RP 2 vs upf1 RP 2upf1 RP 1 vs upf1 RP 2

upf1 RP 2

 WT ctrl vs upf1 RP 2upf1 ctrl vs upf1 RP 2
WT RP 1 vs WT ctrlWT RP 2 vs WT ctrlupf1 RP 1 vs WT ctrlupf1 RP 2 vs WT ctrl

WT ctrl

 upf1 ctrl vs WT ctrl
WT RP 1 vs upf1 ctrlWT RP 2 vs upf1 ctrlupf1 RP 1 vs upf1 ctrlupf1 RP 2 vs upf1 ctrlWT ctrl vs upf1 ctrl

upf1 ctrl

juil. 31 2015 18:19:10
A tool by Marc Descrimes
v2.6