Generic analysis for Malabat et al. 2015 RNA-Seq

main

WT	upf1 vs WT	xrn1 vs WT	upf1xrn1 vs WT
WT vs upf1	upf1	xrn1 vs upf1	upf1xrn1 vs upf1
WT vs xrn1	upf1 vs xrn1	xrn1	upf1xrn1 vs xrn1
WT vs upf1xrn1	upf1 vs upf1xrn1	xrn1 vs upf1xrn1	upf1xrn1

replicates

WT 1	WT 2 vs WT 1	upf1 1 vs WT 1	upf1 2 vs WT 1	xrn1 1 vs WT 1	xrn1 2 vs WT 1	upf1xrn1 1 vs WT 1	upf1xrn1 2 vs WT 1
WT 1 vs WT 2	WT 2	upf1 1 vs WT 2	upf1 2 vs WT 2	xrn1 1 vs WT 2	xrn1 2 vs WT 2	upf1xrn1 1 vs WT 2	upf1xrn1 2 vs WT 2
WT 1 vs upf1 1	WT 2 vs upf1 1	upf1 1	upf1 2 vs upf1 1	xrn1 1 vs upf1 1	xrn1 2 vs upf1 1	upf1xrn1 1 vs upf1 1	upf1xrn1 2 vs upf1 1
WT 1 vs upf1 2	WT 2 vs upf1 2	upf1 1 vs upf1 2	upf1 2	xrn1 1 vs upf1 2	xrn1 2 vs upf1 2	upf1xrn1 1 vs upf1 2	upf1xrn1 2 vs upf1 2
WT 1 vs xrn1 1	WT 2 vs xrn1 1	upf1 1 vs xrn1 1	upf1 2 vs xrn1 1	xrn1 1	xrn1 2 vs xrn1 1	upf1xrn1 1 vs xrn1 1	upf1xrn1 2 vs xrn1 1
WT 1 vs xrn1 2	WT 2 vs xrn1 2	upf1 1 vs xrn1 2	upf1 2 vs xrn1 2	xrn1 1 vs xrn1 2	xrn1 2	upf1xrn1 1 vs xrn1 2	upf1xrn1 2 vs xrn1 2
WT 1 vs upf1xrn1 1	WT 2 vs upf1xrn1 1	upf1 1 vs upf1xrn1 1	upf1 2 vs upf1xrn1 1	xrn1 1 vs upf1xrn1 1	xrn1 2 vs upf1xrn1 1	upf1xrn1 1	upf1xrn1 2 vs upf1xrn1 1
WT 1 vs upf1xrn1 2	WT 2 vs upf1xrn1 2	upf1 1 vs upf1xrn1 2	upf1 2 vs upf1xrn1 2	xrn1 1 vs upf1xrn1 2	xrn1 2 vs upf1xrn1 2	upf1xrn1 1 vs upf1xrn1 2	upf1xrn1 2

août 19 2015 15:35:28
A tool by Marc Descrimes
v2.6