Welcome to our genome browsers for visualization of NGS data

Genome browsers for visualization of NGS data from the manuscript entitled "Native Elongating Transcript Sequencing reveals global anti-correlation between sense and antisense nascent transcription in fission yeast", by Wery et al. First select from the index below the type of data you want to visualize. Then, on the displayed homepage, enter the name of the gene or the coordinates of the region of interest you want to visualize. From the homage, you can also click on "generic analysis" to browse generic statistics (such as mapping stats) and figures relative to each dataset.


Annotation XUT

Show GFF file of XUT defined in the analysis.

Click here to download annotation.


Total RNA-seq in S. pombe

Total RNA-Seq in WT and exo2-delta strains of S. pombe (two biological replicates for each strain).

NET-seq in S. pombe

NET-Seq analysis in a WT strain of S. pombe (two biological replicates)

ChIP-seq in S. pombe (H3, H3K14ac and H4ac)

ChIP-Seq in WT strain of S. pombe (two biological replicates for each strain).

Small RNA-seq in S. pombe

Small RNA-Seq in WT and exo2-delta strains of S.pombe.

RNA-seq meiosis in S. pombe

RNA-Seq analysis in diploid cells of S. pombe collected before (T0) and after 2 (T2), 4 (T4), 6 (T6) and 8 (T8) hours of meiosis induction (two biological replicates for each condition).

Original data from Bitton et al. (2015) Genome Res. 25: 884-896.

RNA-seq spt6 in S. pombe

RNA-Seq analysis in WT and spt6-1 cells of S. pombe, shifted for 2 hours at 37°C (two biological replicates for each condition).

Original data from DeGennaro et al. (2013) Mol. Cell. Biol. 33: 4779-4792.

A tool by Marc Descrimes