Mapping stats replicates for Total RNAseq analysis upon DSB induction in WT, xrn1, rrp6 and trf4 yeast strains.
Return
| case |
JKM139_1_T0 |
JKM139_2_T0 |
JKM139_1_T60 |
JKM139_2_T60 |
JKM139_1_T240 |
JKM139_2_T240 |
xrn1D_1_T0 |
xrn1D_2_T0 |
rrp6D_1_T0 |
rrp6D_2_T0 |
trf4D_1_T0 |
trf4D_2_T0 |
| total |
108512584 |
87266470 |
109043616 |
106034636 |
106942148 |
75876339 |
82059349 |
61216983 |
116072964 |
89501009 |
72866118 |
68946703 |
| duplicates |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
| mapped |
108512584 |
87266470 |
109043616 |
106034636 |
106942148 |
75876339 |
82059349 |
61216983 |
116072964 |
89501009 |
72866118 |
68946703 |
| paired |
108512584 |
87266470 |
109043616 |
106034636 |
106942148 |
75876339 |
82059349 |
61216983 |
116072964 |
89501009 |
72866118 |
68946703 |
| read1 |
55394462 |
44720128 |
55652755 |
54109799 |
54584906 |
38704852 |
41704579 |
31050743 |
59646383 |
46152037 |
37294979 |
35226887 |
| read2 |
53118122 |
42546342 |
53390861 |
51924837 |
52357242 |
37171487 |
40354770 |
30166240 |
56426581 |
43348972 |
35571139 |
33719816 |
| properly paired |
171282 |
183172 |
203598 |
227726 |
209788 |
183688 |
206822 |
110732 |
240050 |
119850 |
67727831 |
64763273 |
| itself and mate mapped |
102356132 |
81276036 |
102320748 |
98764194 |
99882590 |
71017916 |
78447176 |
58527104 |
108591938 |
83501570 |
67853786 |
64853406 |
| singletons |
6156452 |
5990434 |
6722868 |
7270442 |
7059558 |
4858423 |
3612173 |
2689879 |
7481026 |
5999439 |
5012332 |
4093297 |
| mate mapped on a different chr |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
| QC-failed |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
Download as tab file
nov. 16 2016 11:59:16
A tool by Marc Descrimes
v2.6