Annotation of Dcr1-sensitive and Xrn1-sensitive lncRNAs
Total RNA-Seq analysis in WTΔ, dcr1Δ, xrn1Δ and xrn1Δdcr1Δ strains of N. castellii (two biological duplicates for each).
Genome browsers for the visualization of processed NGS data from the manuscript entitled "Endogenous RNAi pathway evolutionarily shapes the destiny of the antisense lncRNAs transcriptome" by Szachnowski et al. First select from the index below the type of data you want to visualize. Then, on the displayed homepage, enter the name of the gene or the coordinates of the region of interest you want to visualize. From the homepage, you can also click on "generic analysis" to browse generic statistics (such as mapping stats) and figures relative to each dataset.
Small RNA-Seq analysis showing 22-23 nt small RNAs densities in Dcr1-GFP cells of N. castellii.
Show GFF file of SUT, CUT and XUT defined in the analysis.
Click here to download annotation.