General mapping stats for Annotation of Dcr1-sensitive and Xrn1-sensitive lncRNAs
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| case |
WT 1 |
WT 2 |
xrn1 1 |
xrn1 2 |
dcr1 1 |
dcr1 2 |
xrn1 dcr1 1 |
xrn1 dcr1 2 |
WT |
xrn1 |
dcr1 |
xrn1 dcr1 |
| total |
41465678 |
40870412 |
64822719 |
54987282 |
53988067 |
42680618 |
68176228 |
62421164 |
82336090 |
119810001 |
96668685 |
130597392 |
| duplicates |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
| mapped |
41465678 |
40870412 |
64822719 |
54987282 |
53988067 |
42680618 |
68176228 |
62421164 |
82336090 |
119810001 |
96668685 |
130597392 |
| paired |
41465678 |
40870412 |
64822719 |
54987282 |
53988067 |
42680618 |
68176228 |
62421164 |
82336090 |
119810001 |
96668685 |
130597392 |
| read1 |
20791626 |
20464252 |
32500668 |
27551309 |
27068054 |
21387919 |
34182667 |
31307082 |
41255878 |
60051977 |
48455973 |
65489749 |
| read2 |
20674052 |
20406160 |
32322051 |
27435973 |
26920013 |
21292699 |
33993561 |
31114082 |
41080212 |
59758024 |
48212712 |
65107643 |
| properly paired |
41099045 |
40630578 |
64196940 |
54596201 |
53575284 |
42357719 |
67576693 |
61658436 |
81729623 |
118793141 |
95933003 |
129235129 |
| itself and mate mapped |
41243756 |
40709252 |
64486994 |
54750590 |
53713856 |
42480702 |
67853408 |
62098468 |
81953008 |
119237584 |
96194558 |
129951876 |
| singletons |
221922 |
161160 |
335725 |
236692 |
274211 |
199916 |
322820 |
322696 |
383082 |
572417 |
474127 |
645516 |
| mate mapped on a different chr |
118358 |
60888 |
233500 |
120852 |
111088 |
99706 |
223742 |
364882 |
179246 |
354352 |
210794 |
588624 |
| QC-failed |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
Download as tab file
avril 03 2019 15:14:19
A tool by Marc Descrimes
v2.6