General mapping stats
Return
| case |
WT 1 |
WT 2 |
dcr1 1 |
dcr1 2 |
rrp6 1 |
rrp6 2 |
dcr1 rrp6 1 |
dcr1 rrp6 2 |
WT |
dcr1 |
rrp6 |
dcr1 rrp6 |
| total |
58097082 |
72457397 |
54787412 |
67933521 |
60009351 |
65315171 |
45057434 |
32234551 |
130554479 |
122720933 |
125324522 |
77291985 |
| duplicates |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
| mapped |
58097082 |
72457397 |
54787412 |
67933521 |
60009351 |
65315171 |
45057434 |
32234551 |
130554479 |
122720933 |
125324522 |
77291985 |
| paired |
58097082 |
72457397 |
54787412 |
67933521 |
60009351 |
65315171 |
45057434 |
32234551 |
130554479 |
122720933 |
125324522 |
77291985 |
| read1 |
29164493 |
36190770 |
27541858 |
34130176 |
30154186 |
32644578 |
22603356 |
16122416 |
65355263 |
61672034 |
62798764 |
38725772 |
| read2 |
28932589 |
36266627 |
27245554 |
33803345 |
29855165 |
32670593 |
22454078 |
16112135 |
65199216 |
61048899 |
62525758 |
38566213 |
| properly paired |
55704451 |
68813966 |
53549281 |
66451952 |
53829360 |
63076673 |
42361670 |
31509065 |
124518417 |
120001233 |
116906033 |
73870735 |
| itself and mate mapped |
56546192 |
70353240 |
53827220 |
66816226 |
56501590 |
63841932 |
43411168 |
31664670 |
126899432 |
120643446 |
120343522 |
75075838 |
| singletons |
1550890 |
2104157 |
960192 |
1117295 |
3507761 |
1473239 |
1646266 |
569881 |
3655047 |
2077487 |
4981000 |
2216147 |
| mate mapped on a different chr |
80122 |
94556 |
181252 |
151120 |
164604 |
60628 |
83884 |
22524 |
174678 |
332372 |
225232 |
106408 |
| QC-failed |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
Download as tab file
janv. 31 2019 17:08:40
A tool by Marc Descrimes
v2.6